ZSWIM9

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZSWIM9 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,182 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZSWIM9-associated GO terms across cancer lineages are Negative regulation of mRNA splicing, via spliceosome, mRNA export from nucleus, and Nucleic acid transport. Each is linked with ZSWIM9 in more than 12 cancer types. Because this analysis shows association rather than direction, both ZSWIM9-to-partner and partner-to-ZSWIM9 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ZSWIM9→partner) and Y-score (partner→ZSWIM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNegative regulation of mRNA splicing, via spliceosome →+0.097+0.945.004<.001313
STOMACHmRNA export from nucleus →+0.116+1.019.003<.001313
STOMACHNucleic acid transport →+0.099+1.083<.001<.001312
STOMACHRNA transport →+0.099+1.083<.001<.001312
LUNG_NSCLC_LUSCHeterochromatin organization →+0.060+0.868.005<.001312
STOMACHmRNA alternative polyadenylation →+0.085+0.825<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,182 associations by consensus.

Exploration