ZSWIM5

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZSWIM5 mutation is significantly associated with the RNA expression of many other genes, with 715 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZSWIM5-associated genes across cancer lineages are OR4X2, CCDC182, and RAX. Each is linked with ZSWIM5 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZSWIM5-to-partner and partner-to-ZSWIM5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR4X2 grouped by ZSWIM5-low versus ZSWIM5-high in KIDNEY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZSWIM5→partner) and Y-score (partner→ZSWIM5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
KIDNEYOR4X2 →+0.036+5.000<.001.00532
STOMACHCCDC182 →+0.025+4.285<.001.00732
BLOOD_LeukemiaRAX →+0.294+3.536<.001.00132
KIDNEYOR2T35 →+0.023+5.000<.001.00531
LUNG_NSCLC_LUSCMAGEB5 →+0.033+4.643<.001.00831
OVARYOR11H2 →+0.046+4.450.002.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 715 associations by consensus.

OR4X2 by ZSWIM5 expression — KIDNEY

Box plot of OR4X2 in ZSWIM5-low vs ZSWIM5-high samples in KIDNEY.

Explore this box plot interactively →

Exploration