ZSCAN30

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZSCAN30 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZSCAN30-associated genes across cancer lineages are KRTAP5-6, ECE2, and OR1C1. Each is linked with ZSCAN30 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZSCAN30-to-partner and partner-to-ZSCAN30 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZSCAN30→partner) and Y-score (partner→ZSCAN30) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaKRTAP5-6 →+0.312+4.874<.001.00231
LARGE_INTESTINEECE2 →+0.353+4.054<.001.00431
LARGE_INTESTINEOR1C1 →+0.076+3.684<.001.00631
LARGE_INTESTINEDCANP1 →+0.014+4.347<.001.00131
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

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