ZNF839

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZNF839 protein abundance is significantly associated with the RNA expression of many other genes, with 2,224 significant associations in total. COAD shows the largest number of these associations.

The most reproducible ZNF839-associated genes across cancer lineages are OPN4, FAM189A2, and KRT18P33. Each is linked with ZNF839 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF839-to-partner and partner-to-ZNF839 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ZNF839 versus OPN4 in BRCA, with a Pearson correlation of 0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF839→partner) and Y-score (partner→ZNF839) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAOPN4 →+0.123+0.458.007.00431
BRCAFAM189A2 →-1.400-0.445.005.00431
BRCAKRT18P33 →-0.328-0.483.008.00731
BRCAZNF705E →-0.318-0.447.003.00231
BRCAKRTAP5-7 →-0.429-0.557.004.00831
BRCAKRT18P54 →+0.224+0.404.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,224 associations by consensus.

ZNF839 vs OPN4 — BRCA

Per-sample scatter of ZNF839 vs OPN4 in BRCA (Pearson r = 0.68).

Explore this scatter interactively →

Exploration