ZNF354A

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF354A mutation is significantly associated with the RNA expression of many other genes, with 22 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZNF354A-associated genes across cancer lineages are RCVRN, IL22, and CTXN2. Each is linked with ZNF354A in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF354A-to-partner and partner-to-ZNF354A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RCVRN grouped by ZNF354A-low versus ZNF354A-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF354A→partner) and Y-score (partner→ZNF354A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSRCVRN →+0.068+4.807<.001<.00131
OESOPHAGUSIL22 →+0.036+4.115<.001.00131
OESOPHAGUSCTXN2 →+0.023+3.392<.001.00731
OESOPHAGUSPIK3R6 →+0.051+3.584.002.00831
LARGE_INTESTINEMAGEB4 →+0.012+3.678<.001.00131
LARGE_INTESTINETFDP3 →+0.015+2.933.004.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 22 associations by consensus.

RCVRN by ZNF354A expression — OESOPHAGUS

Box plot of RCVRN in ZNF354A-low vs ZNF354A-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration