ZNF23

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF23 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZNF23-associated genes across cancer lineages are TRIM51, OR10V1, and RFX4. Each is linked with ZNF23 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF23-to-partner and partner-to-ZNF23 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRIM51 grouped by ZNF23-low versus ZNF23-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF23→partner) and Y-score (partner→ZNF23) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTRIM51 →+0.040+4.152.008.00932
OESOPHAGUSOR10V1 →+0.028+4.017.002.00731
URINARY_TRACTRFX4 →+0.018+3.906<.001.00931
URINARY_TRACTOR2A14 →+0.024+4.050<.001.00231
SOFT_TISSUESPANXN4 →+0.946+4.930<.001.00831
LARGE_INTESTINEMAGEB4 →+0.012+3.678<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

TRIM51 by ZNF23 expression — BLOOD_Leukemia

Box plot of TRIM51 in ZNF23-low vs ZNF23-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration