ZNF12

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZNF12 mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ZNF12-associated genes across cancer lineages are MSH2, ASNS, and ATM. Each is linked with ZNF12 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF12-to-partner and partner-to-ZNF12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MSH2 grouped by ZNF12-low versus ZNF12-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF12→partner) and Y-score (partner→ZNF12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMSH2 →-0.185-1.674.016.04032
UCECASNS →+0.343+1.321.004.02932
UCECATM →-0.454-1.584.002.00932
UCEC14-3-3_beta →-0.111-2.780<.001.00331
UCECEGFR →-0.192-2.196<.001.00931
UCECERK2 →+0.170+1.321.008.02931
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

MSH2 by ZNF12 expression — UCEC

Box plot of MSH2 in ZNF12-low vs ZNF12-high samples in UCEC.

Explore this box plot interactively →

Exploration