ZMYM4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZMYM4 mutation is significantly associated with the RNA expression of many other genes, with 6,264 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ZMYM4-associated genes across cancer lineages are MIR3661, NUDT19P5, and MRPS15. Each is linked with ZMYM4 in more than 2 cancer types. Because this analysis shows association rather than direction, both ZMYM4-to-partner and partner-to-ZMYM4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR3661 grouped by ZMYM4-low versus ZMYM4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZMYM4→partner) and Y-score (partner→ZMYM4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR3661 →+0.542+1.345<.001<.00133
HNSCNUDT19P5 →+0.194+4.295<.001.00833
UCECMRPS15 →+0.330+1.530<.001<.00133
BLCAMIR34AHG →+0.470+3.234.003.00833
SCLCOR51M1 →+0.076+5.189.004.00632
CESCRN7SKP25 →+0.351+4.364<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,264 associations by consensus.

MIR3661 by ZMYM4 expression — UCEC

Box plot of MIR3661 in ZMYM4-low vs ZMYM4-high samples in UCEC.

Explore this box plot interactively →

Exploration