ZKSCAN4

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZKSCAN4 RNA expression is significantly associated with the RNA expression of many other genes, with 20,078 significant associations in total. ACC shows the largest number of these associations.

The most reproducible ZKSCAN4-associated genes across cancer lineages are ZKSCAN3, ZSCAN26, and ZKSCAN8. Each is linked with ZKSCAN4 in more than 33 cancer types. Because this analysis shows association rather than direction, both ZKSCAN4-to-partner and partner-to-ZKSCAN4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZKSCAN4→partner) and Y-score (partner→ZKSCAN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCZKSCAN3 →+1.064+0.463<.001<.001334
UVMZSCAN26 →+1.309+1.014<.001<.001334
SKCMZKSCAN8 →+1.225+0.994<.001<.001334
UVMPCMTD2 →+1.428+0.898<.001<.001334
TGCTZBTB12 →+1.454+0.529<.001.001334
SCLCPRRC2A →+1.672+0.671<.001<.001334
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,078 associations by consensus.

Exploration