ZDHHC4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZDHHC4 protein abundance is significantly associated with the RNA expression of many other genes, with 9,878 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ZDHHC4-associated genes across cancer lineages are CD53, CD84, and TXK. Each is linked with ZDHHC4 in more than 2 cancer types. Because this analysis shows association rather than direction, both ZDHHC4-to-partner and partner-to-ZDHHC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ZDHHC4 versus CD53 in GBM, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZDHHC4→partner) and Y-score (partner→ZDHHC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCD53 →-0.768-0.459<.001<.00133
GBMCD84 →-0.656-0.433<.001<.00133
LSCCTXK →-0.699-0.377<.001<.00133
GBMPTPRC →-0.749-0.375<.001.00133
LSCCPIK3IP1 →-0.575-0.417<.001<.00133
GBMC17orf75 →+0.454+0.546<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,878 associations by consensus.

ZDHHC4 vs CD53 — GBM

Per-sample scatter of ZDHHC4 vs CD53 in GBM (Pearson r = -0.38).

Explore this scatter interactively →

Exploration