ZC3HC1

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZC3HC1 mutation is significantly associated with the immune_cell of many other genes, with 6 significant associations in total. BLCA shows the largest number of these associations.

The most reproducible ZC3HC1-associated genes across cancer lineages are CLP, Platelets, and Keratinocytes. Each is linked with ZC3HC1 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZC3HC1-to-partner and partner-to-ZC3HC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CLP grouped by ZC3HC1-low versus ZC3HC1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZC3HC1→partner) and Y-score (partner→ZC3HC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCLP →+0.091+3.341.024.00531
BLCAPlatelets →+0.016+2.129.012.03531
BLCAKeratinocytes →-0.072-2.964.006.03721
BLCASebocytes →-0.070-2.992.032.03621
UCECPlasma cells →-0.022-2.764.018.00321
UCECClass-switched memory B-cells →-0.062-2.807.013.00311
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

CLP by ZC3HC1 expression — SKCM

Box plot of CLP in ZC3HC1-low vs ZC3HC1-high samples in SKCM.

Explore this box plot interactively →

Exploration