ZBED4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ZBED4 mutation is significantly associated with the RNA expression of many other genes, with 4,561 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ZBED4-associated genes across cancer lineages are RPL23AP82, PPP1R9A-AS1, and NAE1. Each is linked with ZBED4 in more than 3 cancer types. Because this analysis shows association rather than direction, both ZBED4-to-partner and partner-to-ZBED4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL23AP82 grouped by ZBED4-low versus ZBED4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZBED4→partner) and Y-score (partner→ZBED4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRPL23AP82 →+0.380+1.496<.001<.00133
UCECPPP1R9A-AS1 →+0.091+1.362.009<.00133
UCECNAE1 →+0.421+1.485<.001<.00133
COADPBK →+0.809+2.625.003.00533
UCECLEPROTL1 →+0.344+3.354<.001<.00133
UCECMED31 →+0.420+2.096<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,561 associations by consensus.

RPL23AP82 by ZBED4 expression — UCEC

Box plot of RPL23AP82 in ZBED4-low vs ZBED4-high samples in UCEC.

Explore this box plot interactively →

Exploration