YIPF4

Across TCGA cell cohorts, YIPF4 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,138 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible YIPF4-associated GO terms across cancer lineages are Golgi vesicle transport, Vesicle fusion with Golgi apparatus, and Endoplasmic reticulum to Golgi vesicle-mediated transport. Each is linked with YIPF4 in more than 15 cancer types. Because this analysis shows association rather than direction, both YIPF4-to-partner and partner-to-YIPF4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Golgi vesicle transport grouped by YIPF4-low versus YIPF4-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (YIPF4→partner) and Y-score (partner→YIPF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	Golgi vesicle transport →	+0.062	+0.854	<.001	<.001	3	16
KIDNEY	Vesicle fusion with Golgi apparatus →	+0.109	+0.835	<.001	<.001	3	16
OESOPHAGUS	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.095	+0.981	.001	<.001	3	14
SOFT_TISSUE	Endosomal transport →	+0.050	+0.605	<.001	<.001	3	13
OVARY	Endoplasmic reticulum to cytosol transport →	+0.129	+0.884	<.001	<.001	3	13
OVARY	Retrograde protein transport, ER to cytosol →	+0.129	+0.884	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,138 associations by consensus.

Golgi vesicle transport by YIPF4 expression — STOMACH

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