YIPF4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, YIPF4 mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible YIPF4-associated genes across cancer lineages are IL20. Each is linked with YIPF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both YIPF4-to-partner and partner-to-YIPF4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IL20 grouped by YIPF4-low versus YIPF4-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (YIPF4→partner) and Y-score (partner→YIPF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEIL20 →+0.216+3.662<.001.00921
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

IL20 by YIPF4 expression — LARGE_INTESTINE

Box plot of IL20 in YIPF4-low vs YIPF4-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration