YIPF3

Across TCGA patient cohorts, YIPF3 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,153 significant associations in total. THCA shows the largest number of these associations.

The most reproducible YIPF3-associated GO terms across cancer lineages are Retrograde transport, vesicle recycling within Golgi, Antimicrobial humoral response, and Positive regulation of antigen processing and presentation. Each is linked with YIPF3 in more than 17 cancer types. Because this analysis shows association rather than direction, both YIPF3-to-partner and partner-to-YIPF3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Retrograde transport, vesicle recycling within Golgi grouped by YIPF3-low versus YIPF3-high in TGCT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (YIPF3→partner) and Y-score (partner→YIPF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
TGCT	Retrograde transport, vesicle recycling within Golgi →	+0.057	+0.600	<.001	<.001	3	18
ACC	Antimicrobial humoral response →	-0.049	-0.850	<.001	<.001	3	17
ACC	Positive regulation of antigen processing and presentation →	-0.121	-1.091	<.001	<.001	2	18
GBM	Humoral immune response →	-0.037	-0.257	<.001	<.001	3	17
TGCT	Intraciliary retrograde transport →	+0.053	+0.571	<.001	<.001	3	16
THYM	Peroxisomal transport →	+0.056	+0.539	<.001	<.001	2	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,153 associations by consensus.

Retrograde transport, vesicle recycling within Golgi by YIPF3 expression — TGCT

Explore this box plot interactively →