YIPF3

Across TCGA patient cohorts, YIPF3 protein abundance is significantly associated with the RNA expression of many other genes, with 12,039 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible YIPF3-associated genes across cancer lineages are SEPTIN4, CAVIN1, and TPM2. Each is linked with YIPF3 in more than 4 cancer types. Because this analysis shows association rather than direction, both YIPF3-to-partner and partner-to-YIPF3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, YIPF3 versus SEPTIN4 in GBM, with a Pearson correlation of -0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (YIPF3→partner) and Y-score (partner→YIPF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SEPTIN4 →	-0.833	-0.178	<.001	.004	3	5
BRCA	CAVIN1 →	-1.103	-0.397	<.001	<.001	3	5
UCEC	TPM2 →	-1.268	-0.401	.003	.003	3	5
HNSC	FSTL3 →	-1.517	-0.288	<.001	<.001	3	5
CCRCC	TIE1 →	-0.815	-0.287	<.001	<.001	3	5
UCEC	CNRIP1 →	-0.944	-0.340	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,039 associations by consensus.

YIPF3 vs SEPTIN4 — GBM

Explore this scatter interactively →