YBX2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, YBX2 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible YBX2-associated genes across cancer lineages are PTH, OR52K2, and NKX2-6. Each is linked with YBX2 in more than 1 cancer types. Because this analysis shows association rather than direction, both YBX2-to-partner and partner-to-YBX2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PTH grouped by YBX2-low versus YBX2-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (YBX2→partner) and Y-score (partner→YBX2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaPTH →+0.023+6.247<.001<.00131
BLOOD_LymphomaOR52K2 →+0.012+5.209<.001.00531
BLOOD_LeukemiaNKX2-6 →+0.591+5.201<.001.00631
BLOOD_LeukemiaTLE7 →+0.042+5.969<.001.00131
LARGE_INTESTINEOR4F5 →+0.024+3.345<.001.00731
LARGE_INTESTINEARGFX →+0.010+4.022<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

PTH by YBX2 expression — BLOOD_Lymphoma

Box plot of PTH in YBX2-low vs YBX2-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration