YBX1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, YBX1 mutation is significantly associated with the total protein of many other genes, with 30 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible YBX1-associated genes across cancer lineages are Bax, eEF2, and EGFR_pY1068. Each is linked with YBX1 in more than 1 cancer types. Because this analysis shows association rather than direction, both YBX1-to-partner and partner-to-YBX1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Bax grouped by YBX1-low versus YBX1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (YBX1→partner) and Y-score (partner→YBX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECBax →+0.203+1.594.031.04232
UCECeEF2 →+0.441+2.502.001.00231
UCECEGFR_pY1068 →-0.332-3.169<.001<.00131
UCECeIF4E →+0.189+2.584.022.01031
UCECERK2 →+0.256+2.502<.001.00231
UCECGAPDH →+0.472+2.459.025.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 30 associations by consensus.

Bax by YBX1 expression — UCEC

Box plot of Bax in YBX1-low vs YBX1-high samples in UCEC.

Explore this box plot interactively →

Exploration