XPO6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, XPO6 mutation is significantly associated with the RNA expression of many other genes, with 73 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible XPO6-associated genes across cancer lineages are OPN1LW, IL9, and CRYAA. Each is linked with XPO6 in more than 1 cancer types. Because this analysis shows association rather than direction, both XPO6-to-partner and partner-to-XPO6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OPN1LW grouped by XPO6-low versus XPO6-high in BREAST.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (XPO6→partner) and Y-score (partner→XPO6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTOPN1LW →+0.059+5.169<.001.00531
BREASTIL9 →+0.053+5.781<.001.00131
BLOOD_LeukemiaCRYAA →+0.049+4.705.006.00331
BLOOD_LeukemiaLYPD2 →+0.123+4.152<.001.00931
BLOOD_LeukemiaTLE7 →+0.042+6.554<.001<.00131
LUNG_NSCLC_LUADOR2B3 →+0.022+5.228<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 73 associations by consensus.

OPN1LW by XPO6 expression — BREAST

Box plot of OPN1LW in XPO6-low vs XPO6-high samples in BREAST.

Explore this box plot interactively →

Exploration