XPO1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, XPO1 mutation is significantly associated with the RNA expression of many other genes, with 2,780 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible XPO1-associated genes across cancer lineages are ACD, DCLRE1B, and GLE1. Each is linked with XPO1 in more than 2 cancer types. Because this analysis shows association rather than direction, both XPO1-to-partner and partner-to-XPO1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACD grouped by XPO1-low versus XPO1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (XPO1→partner) and Y-score (partner→XPO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECACD →+0.637+2.995<.001<.00133
UCECDCLRE1B →+0.374+1.673.001.00333
UCECGLE1 →+0.415+1.584<.001<.00133
UCECMND1 →+0.611+3.223<.001<.00133
UCECEXOSC9 →+0.364+1.606<.001<.00133
UCECSLF1 →+0.335+1.584.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,780 associations by consensus.

ACD by XPO1 expression — UCEC

Box plot of ACD in XPO1-low vs XPO1-high samples in UCEC.

Explore this box plot interactively →

Exploration