XKR6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, XKR6 mutation is significantly associated with the RNA expression of many other genes, with 691 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible XKR6-associated genes across cancer lineages are FAM160A1, ABCD3, and STIL. Each is linked with XKR6 in more than 1 cancer types. Because this analysis shows association rather than direction, both XKR6-to-partner and partner-to-XKR6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FAM160A1 grouped by XKR6-low versus XKR6-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (XKR6→partner) and Y-score (partner→XKR6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEFAM160A1 →+0.728+3.125.004.00832
LARGE_INTESTINEABCD3 →+0.586+3.252.004.00232
LARGE_INTESTINESTIL →+0.557+3.386.006.00132
LARGE_INTESTINERAP1GDS1 →+0.550+3.628.002<.00132
LARGE_INTESTINEDCK →+0.600+3.628.001<.00132
LARGE_INTESTINENAE1 →+0.557+3.169.002.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 691 associations by consensus.

FAM160A1 by XKR6 expression — LARGE_INTESTINE

Box plot of FAM160A1 in XKR6-low vs XKR6-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration