XKR5

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, XKR5 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,490 significant associations in total. GBM shows the largest number of these associations.

The most reproducible XKR5-associated proteins across cancer lineages are SASH3, SMARCA1, and BLNK. Each is linked with XKR5 in more than 4 cancer types. Because this analysis shows association rather than direction, both XKR5-to-partner and partner-to-XKR5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, XKR5 versus SASH3 in GBM, with a Pearson correlation of -0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (XKR5→partner) and Y-score (partner→XKR5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSASH3 →-0.424-0.487<.001<.00135
HNSCSMARCA1 →+0.605+0.547<.001<.00135
LSCCBLNK →-0.523-0.515<.001.00135
GBMVSIR_S235 →-0.797-0.758<.001<.00134
GBMRGS10 →-0.516-0.471<.001<.00134
GBMWAS →-0.560-0.535<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,490 associations by consensus.

XKR5 vs SASH3 — GBM

Per-sample scatter of XKR5 vs SASH3 in GBM (Pearson r = -0.42).

Explore this scatter interactively →

Exploration