XKR4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, XKR4 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,136 significant associations in total. BONE shows the largest number of these associations.

The most reproducible XKR4-associated GO terms across cancer lineages are Negative regulation of protein localization to plasma membrane, Negative regulation of protein localization to cell periphery, and Positive regulation of striated muscle cell apoptotic process. Each is linked with XKR4 in more than 3 cancer types. Because this analysis shows association rather than direction, both XKR4-to-partner and partner-to-XKR4 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (XKR4→partner) and Y-score (partner→XKR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENegative regulation of protein localization to plasma membrane →-0.145-1.026.001.00134
BONENegative regulation of protein localization to cell periphery →-0.108-1.314.004.00134
CNSPositive regulation of striated muscle cell apoptotic process →+0.096+0.266.006.00833
CNSPositive regulation of cardiac muscle cell apoptotic process →+0.096+0.266.006.00833
SKINCell migration involved in vasculogenesis →-0.130-0.163.001.00733
SKINXenobiotic transport →-0.079-0.088<.001.00733
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,136 associations by consensus.

Exploration