WNK3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, WNK3 mutation is significantly associated with the RNA expression of many other genes, with 431 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible WNK3-associated genes across cancer lineages are PRRC1, CCDC149, and CCDC182. Each is linked with WNK3 in more than 1 cancer types. Because this analysis shows association rather than direction, both WNK3-to-partner and partner-to-WNK3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WNK3→partner) and Y-score (partner→WNK3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPRRC1 →+0.757+3.087<.001.00632
LARGE_INTESTINECCDC149 →+1.137+3.169<.001.00932
STOMACHCCDC182 →+0.033+5.285<.001.00332
OVARYMLN →+0.890+5.807<.001.00131
LUNG_SCLCOR51I1 →+0.052+4.256<.001.00231
LUNG_SCLCOR52E2 →+0.125+3.817<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 431 associations by consensus.

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