WIPF3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WIPF3 protein abundance is significantly associated with the RNA expression of many other genes, with 16,283 significant associations in total. GBM shows the largest number of these associations.

The most reproducible WIPF3-associated genes across cancer lineages are RAB31, FOXL2NB, and AKT3. Each is linked with WIPF3 in more than 3 cancer types. Because this analysis shows association rather than direction, both WIPF3-to-partner and partner-to-WIPF3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, WIPF3 versus RAB31 in OV, with a Pearson correlation of -0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WIPF3→partner) and Y-score (partner→WIPF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRAB31 →-1.233-0.738<.001<.00134
OVFOXL2NB →+1.149+0.949<.001<.00134
BRCAAKT3 →+1.204+0.872<.001.00134
CCRCCF10 →+1.430+0.780.001.00134
BRCASRSF12 →+0.859+0.766<.001<.00134
UCECLINC02609 →+0.470+0.544<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,283 associations by consensus.

WIPF3 vs RAB31 — OV

Per-sample scatter of WIPF3 vs RAB31 in OV (Pearson r = -0.42).

Explore this scatter interactively →

Exploration