WDR43

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, WDR43 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,005 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible WDR43-associated GO terms across cancer lineages are Endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA), rRNA 5'-end processing, and Maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Each is linked with WDR43 in more than 18 cancer types. Because this analysis shows association rather than direction, both WDR43-to-partner and partner-to-WDR43 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) grouped by WDR43-low versus WDR43-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR43→partner) and Y-score (partner→WDR43) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONEEndonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.197+0.955<.001<.001319
BONErRNA 5'-end processing →+0.197+0.955<.001<.001319
BONEMaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.174+0.955<.001<.001319
LARGE_INTESTINETranscription by RNA polymerase I →+0.129+0.877<.001<.001319
BREASTtRNA wobble guanine modification →+0.144+0.721<.001<.001318
URINARY_TRACTNucleolar large rRNA transcription by RNA polymerase I →+0.152+0.923<.001<.001318
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,005 associations by consensus.

Endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) by WDR43 expression — BONE

Box plot of Endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) in WDR43-low vs WDR43-high samples in BONE.

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Exploration