WDR4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, WDR4 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,801 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible WDR4-associated GO terms across cancer lineages are RNA (guanine-N7)-methylation, IMP biosynthetic process, and rRNA processing. Each is linked with WDR4 in more than 17 cancer types. Because this analysis shows association rather than direction, both WDR4-to-partner and partner-to-WDR4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA (guanine-N7)-methylation grouped by WDR4-low versus WDR4-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR4→partner) and Y-score (partner→WDR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINRNA (guanine-N7)-methylation →+0.154+1.174<.001<.001318
BONEIMP biosynthetic process →+0.189+1.314<.001<.001317
BLOOD_MyelomarRNA processing →+0.128+1.441<.001<.001317
BLOOD_MyelomarRNA metabolic process →+0.124+1.615<.001<.001317
BONEEndonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →+0.156+1.314<.001<.001217
BONERibosomal large subunit biogenesis →+0.144+1.505.002<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,801 associations by consensus.

RNA (guanine-N7)-methylation by WDR4 expression — SKIN

Box plot of RNA (guanine-N7)-methylation in WDR4-low vs WDR4-high samples in SKIN.

Explore this box plot interactively →

Exploration