WASHC4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WASHC4 protein abundance is significantly associated with the RNA expression of many other genes, with 15,579 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible WASHC4-associated genes across cancer lineages are LCP2, CRTAM, and PBK. Each is linked with WASHC4 in more than 5 cancer types. Because this analysis shows association rather than direction, both WASHC4-to-partner and partner-to-WASHC4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, WASHC4 versus LCP2 in LSCC, with a Pearson correlation of 0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WASHC4→partner) and Y-score (partner→WASHC4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCLCP2 →+0.853+0.232<.001<.00136
LSCCCRTAM →+0.775+0.218<.001<.00135
GBMPBK →-1.192-0.233<.001<.00135
BRCAKYNU →+1.194+0.208.001<.00135
LSCCCCRL2 →+0.631+0.176<.001<.00135
LSCCUCK2 →-0.908-0.217<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,579 associations by consensus.

WASHC4 vs LCP2 — LSCC

Per-sample scatter of WASHC4 vs LCP2 in LSCC (Pearson r = 0.42).

Explore this scatter interactively →

Exploration