VWC2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VWC2 mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VWC2-associated genes across cancer lineages are eIF4E, ATM, and EGFR_pY1068. Each is linked with VWC2 in more than 1 cancer types. Because this analysis shows association rather than direction, both VWC2-to-partner and partner-to-VWC2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VWC2→partner) and Y-score (partner→VWC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.198+3.013.026.01832
UCECATM →-0.615-3.156.001.01832
UCECEGFR_pY1068 →-0.271-2.906.011.00131
UCECERK2 →+0.258+3.321.001.00931
UCECFOXO3a_pS318_S321 →-0.110-2.575.038.01031
UCECJNK_pT183_Y185 →-0.143-2.584.045.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

Exploration