VWA2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VWA2 protein abundance is significantly associated with the RNA expression of many other genes, with 7,050 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible VWA2-associated genes across cancer lineages are SPATA7, CENPA, and SGO1. Each is linked with VWA2 in more than 4 cancer types. Because this analysis shows association rather than direction, both VWA2-to-partner and partner-to-VWA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VWA2 versus SPATA7 in BRCA, with a Pearson correlation of 0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VWA2→partner) and Y-score (partner→VWA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASPATA7 →+0.415+0.601.001<.00135
UCECCENPA →-0.826-0.722.001.00334
UCECSGO1 →-0.842-0.766<.001<.00134
OVCEP55 →-1.648-1.059<.001.00134
BRCASLC44A3 →+0.728+0.643<.001.00234
BRCASERP2 →+0.939+0.627<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,050 associations by consensus.

VWA2 vs SPATA7 — BRCA

Per-sample scatter of VWA2 vs SPATA7 in BRCA (Pearson r = 0.31).

Explore this scatter interactively →

Exploration