VTRNA3-1P

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VTRNA3-1P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,143 significant associations in total. STAD shows the largest number of these associations.

The most reproducible VTRNA3-1P-associated GO terms across cancer lineages are tRNA metabolic process, Microtubule-based transport, and Positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage. Each is linked with VTRNA3-1P in more than 9 cancer types. Because this analysis shows association rather than direction, both VTRNA3-1P-to-partner and partner-to-VTRNA3-1P results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VTRNA3-1P→partner) and Y-score (partner→VTRNA3-1P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADtRNA metabolic process →+0.139+0.138<.001<.001310
STADMicrotubule-based transport →+0.083+0.112<.001<.001310
STADPositive regulation of intrinsic apoptotic signaling pathway in response to DNA damage →+0.092+0.120<.001<.00139
STADtRNA processing →+0.131+0.127<.001<.00139
STADEstablishment of protein localization to membrane →+0.138+0.130<.001<.00139
STADActivation of innate immune response →+0.114+0.132<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,143 associations by consensus.

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