VTRNA1-3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VTRNA1-3 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,193 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VTRNA1-3-associated GO terms across cancer lineages are Protein maturation by [4Fe-4S] cluster transfer, Nucleoside triphosphate biosynthetic process, and ATP metabolic process. Each is linked with VTRNA1-3 in more than 14 cancer types. Because this analysis shows association rather than direction, both VTRNA1-3-to-partner and partner-to-VTRNA1-3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VTRNA1-3→partner) and Y-score (partner→VTRNA1-3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMProtein maturation by [4Fe-4S] cluster transfer →+0.058+1.266<.001<.001315
STADNucleoside triphosphate biosynthetic process →+0.045+0.504<.001<.001314
STADATP metabolic process →+0.043+0.545<.001<.001314
GBMProtein maturation by iron-sulfur cluster transfer →+0.059+1.593<.001<.001313
STADATP synthesis coupled electron transport →+0.049+0.506<.001<.001313
STADProtein localization to mitochondrion →+0.035+0.406<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,193 associations by consensus.

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