VTRNA1-2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VTRNA1-2 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,898 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible VTRNA1-2-associated proteins across cancer lineages are PHYKPL, CDCP1, and AHNAK_S2984. Each is linked with VTRNA1-2 in more than 3 cancer types. Because this analysis shows association rather than direction, both VTRNA1-2-to-partner and partner-to-VTRNA1-2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VTRNA1-2→partner) and Y-score (partner→VTRNA1-2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPHYKPL →-0.314-1.257.002.00133
UCECCDCP1 →+0.353+1.890.004.00624
CCRCCAHNAK_S2984 →-0.655-1.697<.001<.00133
CCRCCDENND4C_S1623 →-0.832-2.050<.001.00133
LSCCSEC31A_S1163 →-0.347-0.907<.001<.00132
BRCALPIN1 →-0.335-0.875<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,898 associations by consensus.

Exploration