VTI1B

Across TCGA cell cohorts, VTI1B RNA expression is significantly associated with the go_rna of many other GO terms, with 2,795 significant associations in total. BONE shows the largest number of these associations.

The most reproducible VTI1B-associated GO terms across cancer lineages are Protein farnesylation, Retrograde axonal transport, and Vesicle tethering to Golgi. Each is linked with VTI1B in more than 11 cancer types. Because this analysis shows association rather than direction, both VTI1B-to-partner and partner-to-VTI1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein farnesylation grouped by VTI1B-low versus VTI1B-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VTI1B→partner) and Y-score (partner→VTI1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UPPER_AERODIGESTIVE_TRACT	Protein farnesylation →	+0.133	+0.752	<.001	<.001	3	12
LUNG_SCLC	Retrograde axonal transport →	+0.127	+0.629	.005	.001	3	9
OESOPHAGUS	Vesicle tethering to Golgi →	+0.105	+0.478	<.001	.001	3	8
CNS	Nuclear histone mRNA catabolic process →	+0.082	+0.579	<.001	.002	3	8
STOMACH	Protein catabolic process at synapse →	+0.194	+0.836	.001	<.001	3	8
STOMACH	Protein catabolic process at postsynapse →	+0.194	+0.836	.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,795 associations by consensus.

Protein farnesylation by VTI1B expression — UPPER_AERODIGESTIVE_TRACT

Explore this box plot interactively →