VSTM2A

Across TCGA cell cohorts, VSTM2A protein abundance is significantly associated with the RNA expression of many other genes, with 3,260 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible VSTM2A-associated genes across cancer lineages are LAMTOR3, SEC16B, and PAFAH2. Each is linked with VSTM2A in more than 6 cancer types. Because this analysis shows association rather than direction, both VSTM2A-to-partner and partner-to-VSTM2A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VSTM2A versus LAMTOR3 in PANCREAS, with a Pearson correlation of 0.76.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VSTM2A→partner) and Y-score (partner→VSTM2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	LAMTOR3 →	+0.823	+1.285	<.001	<.001	3	7
PANCREAS	SEC16B →	+1.509	+1.146	.001	<.001	3	6
PANCREAS	PAFAH2 →	+1.045	+1.214	.004	.002	2	7
BREAST	CCT4 →	-0.658	-0.764	.002	.005	3	6
LUNG_SCLC	SLC37A1 →	+1.797	+0.656	<.001	.003	3	6
LUNG_SCLC	PPA2 →	+0.744	+1.068	.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,260 associations by consensus.

VSTM2A vs LAMTOR3 — PANCREAS

Explore this scatter interactively →