Across TCGA cell cohorts, VSTM1 protein abundance is significantly associated with the RNA expression of many other genes, with 1,864 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible VSTM1-associated genes across cancer lineages are PTGFRN, CD101, and NUP188. Each is linked with VSTM1 in more than 11 cancer types. Because this analysis shows association rather than direction, both VSTM1-to-partner and partner-to-VSTM1 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VSTM1→partner) and Y-score (partner→VSTM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	PTGFRN →	+3.174	+2.155	.003	.002	3	12
CNS	CD101 →	+1.328	+2.225	.008	<.001	3	7
LUNG_NSCLC_LUAD	NUP188 →	-0.468	-1.049	.006	<.001	3	5
LUNG_NSCLC_LUSC	MRPL49 →	-1.219	-2.206	.004	.001	3	4
STOMACH	MOCOS →	+1.565	+1.283	.002	.001	3	4
LUNG_NSCLC_LUAD	PSMD6 →	-0.570	-1.446	.002	.003	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,864 associations by consensus.

Exploration

VSTM1 survival (RNA) · tumor vs normal (RNA) · all VSTM1 data types