VSIG10L2

Across TCGA cell cohorts, VSIG10L2 RNA expression is significantly associated with the go_rna of many other GO terms, with 132 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible VSIG10L2-associated GO terms across cancer lineages are Maturation of LSU-rRNA, Copper ion transmembrane transport, and Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Each is linked with VSIG10L2 in more than 2 cancer types. Because this analysis shows association rather than direction, both VSIG10L2-to-partner and partner-to-VSIG10L2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Maturation of LSU-rRNA grouped by VSIG10L2-low versus VSIG10L2-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VSIG10L2→partner) and Y-score (partner→VSIG10L2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	Maturation of LSU-rRNA →	-0.070	-0.442	<.001	.005	3	3
BREAST	Copper ion transmembrane transport →	+0.100	+0.615	<.001	.008	3	2
BREAST	Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →	-0.070	-0.488	<.001	.004	3	2
LUNG_SCLC	Lipoxygenase pathway →	-0.193	-0.060	.003	.007	3	2
LUNG_SCLC	Cardiac left ventricle morphogenesis →	+0.186	+0.038	.009	.005	2	3
LUNG_SCLC	Ventricular trabecula myocardium morphogenesis →	-0.091	-0.046	.002	.005	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 132 associations by consensus.

Maturation of LSU-rRNA by VSIG10L2 expression — BREAST

Explore this box plot interactively →