VPS37C

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, VPS37C mutation is significantly associated with the mutation status of many other genes, with 858 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible VPS37C-associated genes across cancer lineages are MED23, GUSB, and OR5T3. Each is linked with VPS37C in more than 1 cancer types. Because this analysis shows association rather than direction, both VPS37C-to-partner and partner-to-VPS37C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MED23 grouped by VPS37C-low versus VPS37C-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VPS37C→partner) and Y-score (partner→VPS37C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaMED23 →+4.000+5.050.008.00812
LARGE_INTESTINEGUSB →+4.087+5.044.001.00112
LARGE_INTESTINEOR5T3 →+4.087+5.044.001.00112
LARGE_INTESTINEGOLIM4 →+3.350+4.584.003.00312
LARGE_INTESTINEFOSL1 →+5.087+4.523.006.00612
LARGE_INTESTINEOR51B4 →+3.672+4.799.002.00212
Each partner links to its Q-omics profile. Showing the 6 strongest of 858 associations by consensus.

MED23 by VPS37C expression — BLOOD_Leukemia

Box plot of MED23 in VPS37C-low vs VPS37C-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration