VPS36

Across TCGA cell cohorts, VPS36 protein abundance is significantly associated with the RNA expression of many other genes, with 4,919 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible VPS36-associated genes across cancer lineages are SNRNP40, SLC30A5, and CD63. Each is linked with VPS36 in more than 5 cancer types. Because this analysis shows association rather than direction, both VPS36-to-partner and partner-to-VPS36 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VPS36 versus SNRNP40 in STOMACH, with a Pearson correlation of -0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VPS36→partner) and Y-score (partner→VPS36) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	SNRNP40 →	-0.780	-0.849	.008	.004	3	6
UPPER_AERODIGESTIVE_TRACT	SLC30A5 →	+0.893	+0.727	<.001	.005	3	6
BLOOD_Lymphoma	CD63 →	+1.726	+0.590	<.001	<.001	3	6
BLOOD_Lymphoma	VMP1 →	+0.992	+0.486	.005	<.001	3	6
BREAST	MARVELD2 →	+1.413	+0.671	<.001	<.001	3	5
BREAST	TMBIM6 →	+0.578	+0.579	.002	.004	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,919 associations by consensus.

VPS36 vs SNRNP40 — STOMACH

Explore this scatter interactively →