VOPP1

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VOPP1 mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VOPP1-associated genes across cancer lineages are CD8+ T-cells and CD8+ Tcm. Each is linked with VOPP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both VOPP1-to-partner and partner-to-VOPP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD8+ T-cells grouped by VOPP1-low versus VOPP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VOPP1→partner) and Y-score (partner→VOPP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCD8+ T-cells →+0.012+2.260.038.03731
UCECCD8+ Tcm →+0.023+2.350.018.03131
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

CD8+ T-cells by VOPP1 expression — UCEC

Box plot of CD8+ T-cells in VOPP1-low vs VOPP1-high samples in UCEC.

Explore this box plot interactively →

Exploration