VN1R79P

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VN1R79P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,315 significant associations in total. STAD shows the largest number of these associations.

The most reproducible VN1R79P-associated GO terms across cancer lineages are Activation of GTPase activity, tRNA metabolic process, and Liposaccharide metabolic process. Each is linked with VN1R79P in more than 9 cancer types. Because this analysis shows association rather than direction, both VN1R79P-to-partner and partner-to-VN1R79P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Activation of GTPase activity grouped by VN1R79P-low versus VN1R79P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VN1R79P→partner) and Y-score (partner→VN1R79P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADActivation of GTPase activity →+0.080+0.102<.001<.001310
STADtRNA metabolic process →+0.100+0.107<.001<.00139
STADLiposaccharide metabolic process →+0.076+0.107<.001<.00138
STADRegulation of double-strand break repair →+0.097+0.118<.001<.00138
ESCABase-excision repair →+0.099+0.106<.001.008110
STADGlycerophospholipid metabolic process →+0.085+0.113<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,315 associations by consensus.

Activation of GTPase activity by VN1R79P expression — STAD

Box plot of Activation of GTPase activity in VN1R79P-low vs VN1R79P-high samples in STAD.

Explore this box plot interactively →

Exploration