VMAC

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, VMAC mass-spec protein is linked to patient survival in 5 of 34 cancer types, making it a survival-associated VMAC data layer compared with 22 for mass-spec protein and 1 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher VMAC mass-spec protein is associated with worse overall survival. In most high-consensus cancer types, elevated VMAC expression acts as an unfavorable survival marker, although some lineages such as PDAC and LUAD show a favorable association.

CCRCC, PDAC, and LSCC are the cancer types where VMAC mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCOSQuartileAll0.7211.000.0119view →
PDACDFSMedianIII,IV0.8340.228.0246view →
LSCCDFSQuartileAll0.6061.000.0226view →
LUADOSQuartileAll1.0000.626.0125view →
HNSCOSMedianII,III,IV0.7200.876.0213view →
Pink = unfavorable, green = favorable. Showing the 5 strongest of 5 lineages.

Exploration