VIT

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VIT RNA expression is significantly associated with the protein abundance of many other proteins, with 9,234 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible VIT-associated proteins across cancer lineages are OLFML1, BIN1, and CD34. Each is linked with VIT in more than 5 cancer types. Because this analysis shows association rather than direction, both VIT-to-partner and partner-to-VIT results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VIT→partner) and Y-score (partner→VIT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVOLFML1 →+0.859+0.708<.001<.00136
HNSCBIN1 →+1.143+0.909<.001.00235
OVCD34 →+0.631+0.657<.001<.00135
OVCOL14A1 →+1.084+0.630<.001<.00135
HNSCLAMB2 →+0.794+0.989<.001<.00135
HNSCPRKAR2B →+0.682+1.208<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,234 associations by consensus.

Exploration