VIPAS39

Across TCGA patient cohorts, VIPAS39 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,100 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible VIPAS39-associated proteins across cancer lineages are PPP4R3A, FKBP3, and PPP2R5E. Each is linked with VIPAS39 in more than 7 cancer types. Because this analysis shows association rather than direction, both VIPAS39-to-partner and partner-to-VIPAS39 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VIPAS39 versus PPP4R3A in LSCC, with a Pearson correlation of 0.66.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VIPAS39→partner) and Y-score (partner→VIPAS39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PPP4R3A →	+0.319	+0.425	<.001	<.001	3	8
PDAC	FKBP3 →	+0.326	+0.329	<.001	<.001	3	8
PDAC	PPP2R5E →	+0.377	+0.304	<.001	<.001	3	7
OV	YLPM1 →	+0.326	+0.513	<.001	<.001	3	7
LSCC	ZC3H14 →	+0.205	+0.344	<.001	<.001	3	7
LUAD	ZFYVE1 →	+0.248	+0.455	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,100 associations by consensus.

VIPAS39 vs PPP4R3A — LSCC

Explore this scatter interactively →