Across TCGA patient cohorts, VCX3B mutation is significantly associated with the RNA expression of many other genes, with 94 significant associations in total. COAD shows the largest number of these associations.

The most reproducible VCX3B-associated genes across cancer lineages are RN7SL63P, SNORD114-18, and RNA5SP418. Each is linked with VCX3B in more than 1 cancer types. Because this analysis shows association rather than direction, both VCX3B-to-partner and partner-to-VCX3B results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VCX3B→partner) and Y-score (partner→VCX3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RN7SL63P →	+0.075	+4.251	<.001	.008	3	2
UCEC	SNORD114-18 →	+0.637	+3.884	<.001	.003	3	2
UCEC	RNA5SP418 →	+0.890	+3.278	<.001	.005	3	2
UCEC	RNA5SP410 →	+0.848	+3.204	.001	.006	3	2
BRCA	MIR8075 →	+0.327	+5.442	<.001	.002	3	1
SKCM	COX6B1P2 →	+0.195	+5.292	<.001	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 94 associations by consensus.

Exploration

VCX3B survival (RNA) · tumor vs normal (RNA) · all VCX3B data types