VCPKMT

Across TCGA cell cohorts, VCPKMT RNA expression is significantly associated with the go_rna of many other GO terms, with 4,071 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible VCPKMT-associated GO terms across cancer lineages are Peptidyl-lysine modification, mRNA 5'-splice site recognition, and Peptidyl-lysine trimethylation. Each is linked with VCPKMT in more than 14 cancer types. Because this analysis shows association rather than direction, both VCPKMT-to-partner and partner-to-VCPKMT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peptidyl-lysine modification grouped by VCPKMT-low versus VCPKMT-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VCPKMT→partner) and Y-score (partner→VCPKMT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	Peptidyl-lysine modification →	+0.052	+0.676	<.001	.002	3	14
OVARY	mRNA 5'-splice site recognition →	+0.130	+0.574	<.001	<.001	2	15
BREAST	Peptidyl-lysine trimethylation →	+0.105	+0.713	<.001	<.001	3	13
LARGE_INTESTINE	mRNA splice site recognition →	+0.123	+0.482	<.001	.009	3	12
BREAST	Hormone metabolic process →	-0.096	-0.433	<.001	.009	3	12
OESOPHAGUS	Microtubule nucleation →	+0.147	+1.226	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,071 associations by consensus.

Peptidyl-lysine modification by VCPKMT expression — LUNG_SCLC

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