VCAM1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VCAM1 protein abundance is significantly associated with the RNA expression of many other genes, with 10,872 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible VCAM1-associated genes across cancer lineages are FCGR2B, SIGLEC10, and TNFSF13B. Each is linked with VCAM1 in more than 8 cancer types. Because this analysis shows association rather than direction, both VCAM1-to-partner and partner-to-VCAM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VCAM1 versus FCGR2B in OV, with a Pearson correlation of 0.50.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VCAM1→partner) and Y-score (partner→VCAM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFCGR2B →+1.281+0.845<.001<.00139
BRCASIGLEC10 →+0.936+0.715<.001<.00138
OVTNFSF13B →+1.411+0.809<.001<.00137
UCECIL21R →+1.252+0.718<.001<.00137
HNSCIL4I1 →+1.055+0.704<.001<.00137
UCECJAK3 →+0.808+0.481<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,872 associations by consensus.

VCAM1 vs FCGR2B — OV

Per-sample scatter of VCAM1 vs FCGR2B in OV (Pearson r = 0.50).

Explore this scatter interactively →

Exploration