VASN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, VASN RNA expression is significantly associated with the go_rna of many other GO terms, with 6,113 significant associations in total. BONE shows the largest number of these associations.

The most reproducible VASN-associated GO terms across cancer lineages are Regulation of intracellular transport, Establishment of protein localization to membrane, and Viral process. Each is linked with VASN in more than 12 cancer types. Because this analysis shows association rather than direction, both VASN-to-partner and partner-to-VASN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of intracellular transport grouped by VASN-low versus VASN-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VASN→partner) and Y-score (partner→VASN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYRegulation of intracellular transport →+0.068+2.656<.001<.001313
UPPER_AERODIGESTIVE_TRACTEstablishment of protein localization to membrane →+0.062+1.570<.001.001312
BONEViral process →+0.091+2.388<.001<.001312
BONENegative regulation of response to endoplasmic reticulum stress →+0.132+3.064<.001<.001312
BONENegative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway →+0.203+2.695<.001<.001312
OVARYProtein stabilization →+0.073+2.510<.001<.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,113 associations by consensus.

Regulation of intracellular transport by VASN expression — OVARY

Box plot of Regulation of intracellular transport in VASN-low vs VASN-high samples in OVARY.

Explore this box plot interactively →

Exploration