VASH1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, VASH1-AS1 RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of VASH1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where VASH1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types VASH1-AS1 is over-expressed in tumor, although a few such as KIRC and BRCA show the opposite, repressed pattern.

KIRC, HNSC, and STAD are the cancer types where VASH1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in VASH1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleII,III,IV−0.356<.00111view →
HNSCAllAll+0.337<.00110view →
STADAllII,III,IV+0.472<.0016view →
BRCAFemaleII,III,IV−0.327<.0016view →
COADAllII,III,IV+0.346.0045view →
LIHCAllAll+0.282<.0015view →
LUADAllII,III,IV−0.317.0093view →
CHOLAllAll+0.826.0062view →
ESCAMaleAll+0.801.0072view →
READFemaleAll+0.554.0222view →
PRADAllAll+0.262<.0012view →
BLCAMaleIV−0.347.0321view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

VASH1-AS1–KIRC

Tumor-vs-normal expression box plot for VASH1-AS1 RNA in KIRC.

Open the KIRC breakdown →

Exploration