VAMP1

Across TCGA patient cohorts, VAMP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,802 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible VAMP1-associated proteins across cancer lineages are DOCK11, RECQL, and CDKN1B. Each is linked with VAMP1 in more than 5 cancer types. Because this analysis shows association rather than direction, both VAMP1-to-partner and partner-to-VAMP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VAMP1 versus DOCK11 in CCRCC, with a Pearson correlation of 0.41.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VAMP1→partner) and Y-score (partner→VAMP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	DOCK11 →	+0.471	+0.735	<.001	<.001	3	6
HNSC	RECQL →	+0.412	+0.937	<.001	<.001	3	4
GBM	CDKN1B →	+0.522	+0.663	<.001	<.001	3	4
HNSC	EIF3G →	-0.204	-0.804	<.001	<.001	3	4
HNSC	GSN →	+0.614	+0.491	<.001	.006	3	4
HNSC	JADE2 →	+0.514	+0.695	<.001	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 15,802 associations by consensus.

VAMP1 vs DOCK11 — CCRCC

Explore this scatter interactively →